Is it possible to differentiate between environmental and fishery effects on abundance‐biomass variation? A case study of blackspot seabream (Pagellus bogaraveo) in the Strait of Gibraltar

We assessed the potential for simulation and modelling of the blackspot seabream (Pagellus bogaraveo) population in the Strait of Gibraltar to discriminate the environmental effects of fishery impacts. A discrete biomass–abundance dynamic model was implemented to obtain a simulated monthly time series of blackspot seabream biomass. On this simulated time series, autoregressive integrated moving average (ARIMA) models were fitted. The best ARIMA fit provided a significant correlation of 0.76 and persistence index higher than 0.85. The proportion of variance non‐explained by the ARIMA models was correlated with a time series of sea surface temperature (SST) and North Atlantic Oscillation (NAO). The analysis of global, annual and winter correlation between the proportion of variance not explained by the ARIMA models and environmental variables showed that significant associations were not detected over the full time series. Our analysis therefore suggests that overexploitation is the main factor responsible for the commercial depletion of blackspot seabream in the Strait of Gibraltar.     

Aphanomyces astaci presence in Japan: a threat to the endemic and endangered crayfish species Cambaroides japonicus?

1. Spread of the crayfish plague pathogen, Aphanomyces astaci, by North American crayfish species is considered one of the main reasons for substantial declines and local extinctions of native European crayfish populations. Owing to human introductions, several American crayfish species have become established throughout the world, and thus pose a potential threat to indigenous crayfish populations susceptible to crayfish plague.
2. In Japan, two such widespread alien species, Procambarus clarkii and Pacifastacus leniusculus, were introduced for aquaculture purposes in the late 1920s and since then successfully expanded their ranges.
3. Aggressive interactions with alien crayfish along with habitat modifications have been considered primarily responsible for drastic declines in populations of the Japanese endemic crayfish, Cambaroides japonicus, observed in the last few decades. However, the presence of the crayfish plague pathogen, to which Japanese crayfish are susceptible, may be expected, and could contribute to these declines.
4. Only recently, A. astaci has been reported from Taiwan, and to our knowledge no study focusing on its presence outside of the Western Palearctic has been conducted.
5. To fill this gap, 54 P. clarkii and 47 P. leniusculus individuals from five different Japanese locations were screened using molecular methods recommended by the World Organization for Animal Health. Aphanomyces astaci DNA was detected in all studied populations, altogether in 61% and 21% of examined individuals of P. clarkii and P. leniusculus, respectively.
6. The results provide the first evidence of A. astaci presence in Japan and highlight the threat of pathogen transmission to C. japonicus populations.

Copyright © 2016 John Wiley & Sons, Ltd.     

A new lean no time test baking method with improved discriminating power

In response to customer concerns related to gluten strength in commercial baking, the Canadian Grain Commission assessed whether the Canadian Short Process (CSP) test bake method was generating useful data related to intrinsic strength of wheat varieties. Assessment of CSP loaf volume data for Canadian variety trials spanning 2003 to 2013 showed very little correlation with dough strength parameters as measured by farinograph and extensigraph. A lean no time (LNT) test baking method was developed that can better discriminate genotypes and provide objective indicators of the effect of intrinsic dough strength on baking quality. From early method development, through method validation and verification using diverse sets of samples targeting different Canadian wheat classes and grown in three different crop years, results showed the LNT method to be more discriminating and easily adopted by other laboratories. In 2015, the LNT method was adopted as the method of choice in future Canadian variety registration trials. The LNT method is fast, simple and well-suited to high throughput test baking conditions encountered in the evaluation of large numbers of breeder lines. A new objective parameter, loaf top ratio, was also introduced and found to correlate well with dough strength and dough handling properties.     

A genetic linkage map in southern‐by‐spring oat identifies multiple quantitative trait loci for adaptation and rust resistance

We developed 178 recombinant inbred lines from a southern‐by‐spring oat population designated as “TxH.” These lines were genotyped to generate a high‐quality linkage map that resolved 6,902 markers into 21 linkage groups that matched closely with the latest hexaploid oat consensus map. Three major quantitative trait loci (QTLs) affecting heading date were found in locations that are consistent with known QTLs and candidate genes, and two other QTLs affecting heading date were found in novel locations. Five QTLs affecting plant height were found. Both sets of QTLs are responsible for transgressive segregation observed for these two traits. Four QTLs affecting resistance to crown rust, caused by the pathogen Puccinia coronata f. sp. avenae, were identified. Two of these QTLs are consistent with known clusters of rust resistance genes, while two may represent new locations of novel rust resistance genes. A complete set of SNP sequences suitable for generating markers for molecular selection is provided.     

施氮量和采收时期对油蔬两用型油菜菜薹维生素合成的影响

为明确施氮量和采收时期对油蔬两用型油菜薹维生素含量的影响,以富硒1号为材料,采用裂区试验设计,设置3个施氮量(120、180和240 kg·hm^-2)和4个采收时期(以株高20、30、40和50 cm表示),分析了油菜薹维生素C、维生素E、维生素B₁和维生素B₆含量的变化;比较了半乳糖内酯脱氢酶(GalLDH)、抗坏血酸氧化酶(AAO)、抗坏血酸过氧化物酶(APX)、脱氢抗坏血酸还原酶(DHAR)和单脱氢抗坏血酸还原酶(MDHAR)活性,并分析了维生素家族基因在菜薹中的表达量。结果表明,随着施氮量的增加,油菜薹还原型维生素C(AsA)含量降低;氧化型维生素C(DHA)含量在株高20 cm采收时增加,但在30 cm及以上株高采收时则降低;维生素E和维生素B₆含量先增加后降低;维生素B₁含量增加;维生素C合成关键酶GalLDH活性先略增加后降低;AAO和DHAR活性增加,APX和MDHAR活性则整体表现为先增加后降低。且施氮量增加后,维生素家族各基因在株高30和40 cm采收的菜薹中主要表现为正向调控,而在株高20和50 cm采收的菜薹中主要表现为负向调控。就采收时期而言,菜薹中的维生素含量在株高30~40 cm时高于其他时期;在同一施氮量下,随着菜薹采收株高的增加,维生素家族基因的表达量主要呈上调模式。综合分析可知,GalLDH活性的降低以及AAO/DHAR和APX/MDHAR代谢平衡是增施氮肥导致菜薹维生素C含量降低的重要原因。本研究结果为油蔬两用型油菜薹优质栽培技术提供了理论依据。     

大白菜抽薹相关基因BrFLC1的KASP标记开发

为了提高大白菜耐抽薹品种的分子育种效率,本研究针对大白菜抽薹相关基因BrFLC1第6个内含子的第一个碱基(Pi6+1)G-A的SNP变异开发进行高通量检测的竞争性等位基因特异性PCR(KASP)标记。结果表明,开发的KASP标记BrFLC1-KASP1可有效将晚抽薹类型材料Y177-12(G)和早抽薹类型材料Y195-93(A)分为2组。利用BrFLC1-KASP1标记可以对57份大白菜材料的基因型进行有效鉴别,且鉴定结果与酶切扩增多态性标记(CAPS)G-MvaI以及直接测序法的鉴定结果完全一致。综上所述, BrFLC1-KASP1标记在大白菜材料中具有通用性,且具有准确率高、成本低、效率高的特点。本研究结果对大白菜耐抽薹性的分子标记辅助选择具有重要的育种实践价值。     

盐胁迫下宁夏枸杞Na+吸收及Na+/H+转运蛋白与H+-ATPase基因表达的研究

为从分子水平揭示宁夏枸杞钠的吸收积累机理,本试验采用原子吸收分光光度法和实时荧光定量PCR(RT-qPCR)方法,对盐胁迫下宁夏枸杞根中Na⁺、K⁺含量以及质膜和液泡膜Na⁺/H⁺转运蛋白与H⁺-ATPase基因表达水平进行测定分析。结果表明,相同胁迫时间下,随着NaCl处理浓度的增加,枸杞根系中Na⁺浓度总体呈缓慢增加趋势,K⁺含量呈先增加后减少趋势,Na⁺/K⁺比值呈先减少后增加趋势;编码质膜和液泡膜的Na⁺/H⁺转运蛋白基因LbSOS1、LbNHX1以及液泡膜H⁺-ATPase基因LbVHA-C1表达量均呈升高趋势,质膜H⁺-ATPase基因LbHA1表达量呈先升高后降低趋势。相同NaCl处理浓度下,随着胁迫时间的延长,Na⁺含量总体呈增加趋势,K⁺含量呈先增加后减少趋势,Na⁺/K⁺比值呈增加趋势。LbSOS1、LbNHX1表达量总体呈先升高后降低趋势,LbVHA-C1、LbHA1表达量总体呈降低的趋势。相关性分析显示,不同胁迫时间下,枸杞根中LbSOS1、LbNHX1、LbVHA-C1和LbHA1表达量与Na⁺含量存在一定的正相关或负相关。上述结果表明,在低浓度NaCl胁迫时,维持枸杞体内较高的K⁺/Na⁺比值是宁夏枸杞耐盐的主要方式之一,同时也说明在胁迫初期,质膜和液泡膜的Na⁺/H⁺转运蛋白与H⁺-ATPase参与了枸杞细胞中Na⁺及时排出胞外和区隔于液泡,从而保持了根细胞内Na⁺的稳定性。此外,随着胁迫时间的延长和NaCl处理浓度的增加,LbSOS1、LbNHX1、LbVHA-C1和LbHA1的表达水平均降低,而 Na⁺积累量大幅增加,致使枸杞抗盐性降低。本研究揭示了宁夏枸杞的耐盐机理,为利用宁夏枸杞改良宁夏大面积盐碱地提供了理论依据。     

有机质浸染砂水泥土的力学特性及本构关系

为研究海南省海湾地区分布的有机质浸染砂水泥土的力学特性,该文首先对有机质浸染砂水泥土和标准砂水泥土进行无侧限抗压强度对比试验(采用配合比均为熟石灰掺入比7.5%、水泥掺入比20%、水灰比0.45),定量分析养护龄期对其无侧限抗压强度及试样破坏形式的影响。然后对有机质浸染砂水泥土进行单轴抗压试验,获得了水泥土材料的应力-应变全过程曲线、刚度变化规律以及改进邓肯-张本构模型。结果表明:1)有机质浸染砂水泥土试样的破坏类型为塑性剪切破坏和脆性剪切破坏;2)有机质浸染砂水泥土抗压强度随着养护龄期的增加基本呈指数形式增长,但在养护龄期14 d后,增长速度逐渐降低并趋于稳定;3)随着养护龄期增长,水泥土刚度增加。在加载初期,水泥土切线模量随着轴向应变增加而增大,呈现刚度硬化现象;4)基于单轴抗压试验得到应力-应变全过程曲线,可分为2个阶段:塑性阶段、软化阶段;5)通过对应力-应变全曲线的描述,得到了修正的邓肯-张模型,确定模型参数后,与实测数据对比发现,该修正模型可以模拟有机质浸染砂水泥土的应力-应变关系。     

运用植被指数时序特征对落叶松人工林分类

为探究植被指数时序特征是否有利于落叶松人工林提取,以孟家岗林场为研究试验区域,根据落叶松人工林季相和物候特征,利用Landsat8OLI影像数据提取研究区内5种植被的归一化植被指数(I NDV)、差值植被指数(I DV)、比值植被指数(I RV)、增强型植被指数(I EV),构建相应的植被指数时序特征。采用最大似然和随机森林两种方法对单一时相影像和加入植被指数时序特征的影像进行对比试验。结果表明:影像中加入植被指数时序特征后,最大似然算法的分类总体精度为89.53%,Kappa系数为0.87,比单一时序特征的影像分类精度提高了13.35%;随机森林算法的森林类型分类总体精度为93.22%,Kappa系数为0.92,比单一时序特征的影像分类精度提高了19.8%。因此,加入植被指数时序特征后能得到更高的落叶松人工林提取精度。     

石粉与减水剂兼容性试验研究

为发挥石粉生态混凝土绿色环保的特点,在满足规范和成本要求的条件下,提高石粉的利用价值,以确定适用减水剂类别。通过在石粉砂浆中应用4种常用的减水剂,研究了其不同减水剂环境下石粉砂浆和凝结时间及抗压强度之间的关系。结果表明:石粉砂浆在不同减水剂环境中凝结时间及抗压强度没有明显区别,进一步为高掺量石粉生态混凝土的应用与发展提供参考。